About this tool

AS-EAST annotates and analyzes users' uploaded transcript data using the data stored in AS-ALPS.

Users can determine whether novel transcripts encode AS isoforms, and annotate functional domains and the interacting residues with other molecules in the AS isoforms.

Detection of AS regions

Generate an exon-skipped transcript sequence from a RefSeq transcript sequence

DataSet: for (e.g. PKM2, IL4, LYPLA1) (e.g. 5315, 3565, 10434) (e.g. NM_010207, ENSMUST00000101095) (e.g. Fgfr2, Ctps2) (e.g. 14183, 55936) (e.g. NM_001170373, FBtr0075999) (e.g. ARY, Nrx-IV) (e.g. 3355076, 39387) (e.g. NM_065028, F52D10.3b.1) (e.g. hsp-60, ftt-2) (e.g. 175316, 181348) (e.g. NM_100718, AT2G42500.2) (e.g. CRT3, PP2A-4) (e.g. 837365, 818850) (e.g. NM_001057803, LOC_Os01g06470.1) (e.g. Os03g0748400, Os01g0158000) (e.g. 4334107, 4324088)